PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0586s0170.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 202aa    MW: 22750.3 Da    PI: 5.6485
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0586s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.21.7e-45121402127
                     NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                             p+Gf FhPtdeel++++Lk k+ g   ++  +i+ev+++++ePw+Lp  ++++++++ wyfFs+r+ ky++ k+++r+tk+gyWk t
  SapurV1A.0586s0170.1.p  12 PKGFGFHPTDEELINHFLKLKMIGGCDHEVAIIAEVNVCNSEPWELPglSEIQSNDTVWYFFSPRNYKYSNRKQASRTTKAGYWKVT 98 
                             89*******************99988777699***************6449999999****************************** PP

                     NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                             g+d+ ++++ +ge++g kk+Lvfy+gr p+g++t+Wvmhey+
  SapurV1A.0586s0170.1.p  99 GNDRIIMAAkTGEQIGKKKSLVFYNGRVPNGVRTNWVMHEYN 140
                             *******9878999***************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-523158IPR003441NAC domain
PROSITE profilePS5100550.6911159IPR003441NAC domain
PfamPF023652.9E-2412140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MTSSAAPFPS APKGFGFHPT DEELINHFLK LKMIGGCDHE VAIIAEVNVC NSEPWELPGL  60
SEIQSNDTVW YFFSPRNYKY SNRKQASRTT KAGYWKVTGN DRIIMAAKTG EQIGKKKSLV  120
FYNGRVPNGV RTNWVMHEYN PTFNFHNQRD FVLCKLKRNS DDELTCEEGG SSSNVASDFP  180
NNVTEEDQLE AFLGVDEGYY N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-361015616162NO APICAL MERISTEM PROTEIN
1ut4_B3e-361015616162NO APICAL MERISTEM PROTEIN
1ut7_A3e-361015616162NO APICAL MERISTEM PROTEIN
1ut7_B3e-361015616162NO APICAL MERISTEM PROTEIN
3swm_A3e-361015619165NAC domain-containing protein 19
3swm_B3e-361015619165NAC domain-containing protein 19
3swm_C3e-361015619165NAC domain-containing protein 19
3swm_D3e-361015619165NAC domain-containing protein 19
3swp_A3e-361015619165NAC domain-containing protein 19
3swp_B3e-361015619165NAC domain-containing protein 19
3swp_C3e-361015619165NAC domain-containing protein 19
3swp_D3e-361015619165NAC domain-containing protein 19
4dul_A3e-361015616162NAC domain-containing protein 19
4dul_B3e-361015616162NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011035248.11e-136PREDICTED: NAC domain-containing protein 69-like isoform X2
SwissprotF4JN352e-50NTL9_ARATH; Protein NTM1-like 9
TrEMBLB9IC641e-131B9IC64_POPTR; Uncharacterized protein
STRINGPOPTR_0014s07210.11e-130(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.31e-51NAC transcription factor-like 9